User Tools

Site Tools


biological-databases

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revision Previous revision
Last revision Both sides next revision
biological-databases [2020/04/08 09:39]
aorth
biological-databases [2020/04/08 09:56]
aorth
Line 34: Line 34:
 </code> </code>
  
-2: NCBI introduced database format version 5 in 2019 and these only work with BLAST tools starting from 2.9.0. They are no longer updating the version 4 databses, but we have preserved them in a separate directory if you are using tools that do not support version 5+2. In 2019 [[https://ncbiinsights.ncbi.nlm.nih.gov/2019/05/24/have-you-tried-blast-2-9-0-and-version-5-blast-databases-dbv5/|NCBI introduced BLAST database format version 5]] and these only work with BLAST tools starting from 2.9.0. NCBI are no longer updating the version 4 databases, but we have preserved them in a separate directory if you are using tools that do not support version 5:
  
 +''/export/data/bio/ncbi/blast/db/v4''
biological-databases.txt · Last modified: 2020/04/08 11:14 by aorth