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beast-software [2015/08/03 16:08]
aorth
beast-software [2016/11/14 15:02] (current)
joguya
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 ====== BEAST ====== ====== BEAST ======
 +
 BEAST is a cross-platform program for Bayesian MCMC analysis of molecular sequences. BEAST is a cross-platform program for Bayesian MCMC analysis of molecular sequences.
  
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   * Version: 1.8.2   * Version: 1.8.2
   * Added: August, 2014   * Added: August, 2014
-  * Updated: ​March2015+  * Updated: ​November2016
   * Link: http://​beast.bio.ed.ac.uk/​   * Link: http://​beast.bio.ed.ac.uk/​
  
 ===== Usage ===== ===== Usage =====
  
-=== See versions of beast which are available ​===+See which versions of beast are available:
 <​code>​$ module avail beast</​code>​ <​code>​$ module avail beast</​code>​
 +
 +Load beast
 +<​code>​$ module load beast/​1.8.3</​code>​
 +
  
 ===== Installation ====== ===== Installation ======
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 <​code>​$ cd /tmp <​code>​$ cd /tmp
-$ wget 'http://tree.bio.ed.ac.uk/download.php?​id=92&​num=3' -O BEASTv1.8.2.tgz +$ wget https://github.com/​beast-dev/​beast-mcmc/​releases/download/v1.8.3/BEASTv1.8.3.tgz 
-$ tar xf BEASTv1.8.2.tgz  +$ tar -xvf BEASTv1.8.3.tgz  
-$ cd BEASTv1.8.2 +$ cd BEASTv1.8.3 
-$ sudo mkdir /​export/​apps/​beast/​1.8.2 +$ sudo mkdir -p /​export/​apps/​beast/​1.8.3 
-$ sudo cp -rv * /​export/​apps/​beast/​1.8.2</​code>​+$ sudo cp -r . /​export/​apps/​beast/​1.8.3/ 
 +</​code>​
beast-software.txt · Last modified: 2016/11/14 15:02 by joguya