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BEAGLE is a high-performance library that can perform the core calculations at the heart of most Bayesian and Maximum Likelihood phylogenetics packages such as BEAST.



See which versions of beagle are available:

$ module avail beagle

Load one version into your environment:

$ module load beagle/3.1.2

Beagle is not useful by itself, but you can use it to speed up BEAST.


Notes from the sysadmin during installation:

$ cd /tmp
$ wget
$ tar xf v3.1.2.tar.gz 
$ cd beagle-lib-3.1.2
$ scl enable devtoolset-7 bash
$ ./
$ ./configure --prefix=/export/apps/beagle/3.1.2
$ sudo mkdir -p /export/apps/beagle/3.1.2
$ sudo chown aorth /export/apps/beagle/3.1.2
$ make install
$ sudo chown -R root:root /export/apps/beagle/3.1.2
beagle-software.1569785724.txt.gz · Last modified: 2019/09/29 19:35 by aorth