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beagle-software

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beagle

BEAGLE is a high-performance library that can perform the core calculations at the heart of most Bayesian and Maximum Likelihood phylogenetics packages such as BEAST.

Information

Usage

See versions of beagle which are available

$ module avail beagle

To use with BEAST, make sure beagle is loaded first!

Installation

Notes from the sysadmin during installation:

$ cd /tmp
$ git clone https://github.com/beagle-dev/beagle-lib.git
$ cd beagle-lib
$ scl enable devtoolset-2 bash
$ ./autogen.sh
$ ./configure --prefix=/export/apps/beagle/git-c455af1f
$ sudo mkdir -p /export/apps/beagle/git-c455af1f
$ sudo chown aorth /export/apps/beagle/git-c455af1f
$ make install
$ sudo chown -R root:root /export/apps/beagle/git-c455af1f
$ exit
beagle-software.1438607313.txt.gz · Last modified: 2015/08/03 16:08 by aorth