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beagle-software
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beagle-software [2015/08/03 13:08] aorth created |
beagle-software [2018/10/21 13:43] aorth |
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| - | ====== | + | ====== |
| BEAGLE is a high-performance library that can perform the core calculations at the heart of most Bayesian and Maximum Likelihood phylogenetics packages such as BEAST. | BEAGLE is a high-performance library that can perform the core calculations at the heart of most Bayesian and Maximum Likelihood phylogenetics packages such as BEAST. | ||
| ===== Information ===== | ===== Information ===== | ||
| - | * Version: | + | * Latest |
| * Added: August, 2015 | * Added: August, 2015 | ||
| + | * Updated: October, 2018 | ||
| * Link: https:// | * Link: https:// | ||
| + | | ||
| ===== Usage ===== | ===== Usage ===== | ||
| - | === See versions of beagle | + | See which versions of beagle are available: |
| < | < | ||
| - | To use with BEAST, make sure beagle is loaded first! | + | Load one version into your environment: |
| + | < | ||
| + | |||
| + | Beagle | ||
| ===== Installation ====== | ===== Installation ====== | ||
| Line 19: | Line 23: | ||
| < | < | ||
| - | $ git clone https:// | + | $ wget https:// |
| - | $ cd beagle-lib | + | $ tar xf v3.0.2.tar.gz |
| - | $ scl enable devtoolset-2 bash | + | $ cd beagle-lib-3.0.2 |
| $ ./ | $ ./ | ||
| - | $ ./configure --prefix=/ | + | $ ./configure --prefix=/ |
| - | $ sudo mkdir -p / | + | $ sudo mkdir -p / |
| - | $ sudo chown aorth / | + | $ sudo chown aorth / |
| $ make install | $ make install | ||
| - | $ sudo chown -R root:root / | + | $ sudo chown -R root:root / |
| - | $ exit</ | + | |
beagle-software.txt · Last modified: 2019/09/29 19:35 by aorth
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