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bamtools-software [2017/05/03 10:05]
aorth
bamtools-software [2017/12/26 12:51] (current)
aorth
Line 4: Line 4:
 ===== Information ===== ===== Information =====
  
-  * Version: 2.4.0+  * Version: 2.5.1
   * Added: February, 2016   * Added: February, 2016
 +  * Updated: December, 2017
   * Link: https://​github.com/​pezmaster31/​bamtools   * Link: https://​github.com/​pezmaster31/​bamtools
  
Line 14: Line 15:
 </​code>​ </​code>​
  
-Load bamtools +Load one version into your environment and run it: 
-<​code>​$ module load bamtools/2.4.0</​code>​+<​code>​$ module load bamtools/2.5.
 +$ bamtools</​code>​
  
 ===== Installation ====== ===== Installation ======
 Notes from the sysadmin during installation:​ Notes from the sysadmin during installation:​
  
-<​code>​ +<​code>​$ cd /tmp 
-$ cd /tmp +$ wget https://​github.com/​pezmaster31/​bamtools/​archive/​v2.5.1.zip 
-$ wget https://​github.com/​pezmaster31/​bamtools/​archive/​v2.4.0.tar.gz +unzip v2.5.1.zip 
-tar -xvf v2.4.0.tar.gz +$ cd bamtools-2.5.1
-$ cd bamtools-2.4.0/+
 $ mkdir build $ mkdir build
 $ cd build $ cd build
-cmake .. +sudo yum install cmake3 
-make +sudo mkdir -p /​export/​apps/​bamtools/​2.5.1 
-cd .. +sudo chown aorth /​export/​apps/​bamtools/​2.5.1 
-rm -rf build +cmake3 ​-DCMAKE_INSTALL_PREFIX=/​export/​apps/​bamtools/​2.5.1 .. 
-$ sudo mkdir -p /​export/​apps/​bamtools/​2.4.0/ +$ make install 
-$ sudo cp -r . /​export/​apps/​bamtools/​2.4.0/ +$ sudo chown -R root:​root ​/​export/​apps/​bamtools/​2.5.1</​code>​
-</​code>​ +
bamtools-software.1493795111.txt.gz · Last modified: 2017/05/03 10:05 by aorth