User Tools

Site Tools


bamtools-software

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revision Previous revision
Last revision Both sides next revision
bamtools-software [2017/05/03 07:05]
aorth
bamtools-software [2017/12/25 21:25]
aorth
Line 4: Line 4:
 ===== Information ===== ===== Information =====
  
-  * Version: 2.4.0+  * Version: 2.5.1
   * Added: February, 2016   * Added: February, 2016
 +  * Updated: December, 2017
   * Link: https://github.com/pezmaster31/bamtools   * Link: https://github.com/pezmaster31/bamtools
  
Line 14: Line 15:
 </code> </code>
  
-Load bamtools +Load one version into your environment and run it: 
-<code>$ module load bamtools/2.4.0</code>+<code>$ module load bamtools/2.5.
 +$ bamtools/code>
  
 ===== Installation ====== ===== Installation ======
 Notes from the sysadmin during installation: Notes from the sysadmin during installation:
  
-<code> +<code>$ cd /tmp 
-$ cd /tmp +$ wget https://github.com/pezmaster31/bamtools/archive/v2.5.1.zip 
-$ wget https://github.com/pezmaster31/bamtools/archive/v2.4.0.tar.gz +unzip v2.5.1.zip 
-tar -xvf v2.4.0.tar.gz +$ cd bamtools-2.5.1
-$ cd bamtools-2.4.0/+
 $ mkdir build $ mkdir build
 $ cd build $ cd build
-cmake .. +sudo yum install cmake3 
-make +sudo mkdir -p /export/apps/bamtools/2.5.1 
-cd .. +sudo chown aorth /export/apps/bamtools/2.5.1 
-rm -rf build +cmake3 -DCMAKE_INSTALL_PREFIX=/export/apps/bamtools/2.5.1 .. 
-$ sudo mkdir -p /export/apps/bamtools/2.4.0/ +$ make install 
-$ sudo cp -r . /export/apps/bamtools/2.4.0/ +$ sudo chown -R root:root /export/apps/bamtools/2.5.1</code>
-</code> +
bamtools-software.txt · Last modified: 2017/12/26 09:51 by aorth