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augustus-software
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This shows you the differences between two versions of the page.
| Both sides previous revision Previous revision | Last revision Both sides next revision | ||
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augustus-software [2017/05/23 15:08] aorth |
augustus-software [2018/01/07 00:34] aorth |
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| Line 4: | Line 4: | ||
| ===== Information ===== | ===== Information ===== | ||
| - | * Version: 3.2.3 | + | * Version: 3.3 |
| - | * Added: | + | * Added: |
| * Link: http:// | * Link: http:// | ||
| Line 14: | Line 14: | ||
| </ | </ | ||
| - | Load augustus | + | Load one version into your environment: |
| - | < | + | < |
| ===== Installation ====== | ===== Installation ====== | ||
| Line 21: | Line 21: | ||
| < | < | ||
| - | $ wget http:// | + | $ wget http:// |
| - | $ tar xf augustus-3.2.3.tar.gz | + | $ tar xf augustus-3.3.tar.gz |
| - | $ cd augustus-3.2.3 | + | $ cd augustus |
| $ sed -i ' | $ sed -i ' | ||
| - | $ export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/ | + | $ export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/ |
| - | $ sed -i ' | + | $ sed -i ' |
| - | $ sed -i ' | + | $ sed -i ' |
| - | $ sudo mkdir / | + | $ sudo yum install boost-devel |
| - | $ sudo chown aorth / | + | $ make clean |
| - | $ make INSTALLDIR=/ | + | $ make |
| - | $ sudo chown -R root:root / | + | $ sudo mkdir / |
| - | </ | + | $ sudo chown aorth / |
| + | $ make INSTALLDIR=/ | ||
| + | $ find / | ||
| + | $ sudo chown -R root:root / | ||
| - | Augustus requires bamtools, but for some reason it doesn' | + | Augustus requires bamtools |
augustus-software.txt · Last modified: 2018/01/07 15:40 by aorth
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