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aegean-software [2018/02/05 14:29] (current)
aorth created
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 +====== AEGeAn ======
 +Integrated toolkit for analysis and evaluation of annotated genomes.
  
 +===== Information =====
 +
 +  * Version: 0.16.0
 +  * Added: February, 2018
 +  * Link: https://​brendelgroup.github.io/​AEGeAn/​
 +
 +===== Usage =====
 +
 +See versions of aegean which are available:
 +<​code>​$ module avail aegean</​code>​
 +
 +Load one version into your environment:​
 +<​code>​$ module load aegean/​0.16.0</​code>​
 +
 +===== Installation ======
 +Notes from the sysadmin during installation:​
 +
 +<​code>​$ cd /tmp
 +$ wget http://​genometools.org/​pub/​genometools-1.5.9.tar.gz
 +$ tar xf genometools-1.5.9.tar.gz
 +$ cd genometools-1.5.9
 +$ sudo mkdir -p /​export/​apps/​aegean/​0.16.0
 +$ sudo chown aorth /​export/​apps/​aegean/​0.16.0
 +$ make prefix=/​export/​apps/​aegean/​0.16.0
 +$ make prefix=/​export/​apps/​aegean/​0.16.0 install
 +$ cd ..
 +$ wget https://​github.com/​BrendelGroup/​AEGeAn/​archive/​v0.16.0.tar.gz
 +$ tar xf v0.16.0.tar.gz
 +$ cd AEGeAn-0.16.0
 +$ make prefix=/​export/​apps/​aegean/​0.16.0
 +$ make prefix=/​export/​apps/​aegean/​0.16.0 install install-scripts
 +$ sudo chown -R root:root /​export/​apps/​aegean/​0.16.0</​code>​
aegean-software.txt · Last modified: 2018/02/05 14:29 by aorth