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aegean-software

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AEGeAn

Integrated toolkit for analysis and evaluation of annotated genomes.

Information

Usage

See versions of aegean which are available:

$ module avail aegean

Load one version into your environment:

$ module load aegean/0.16.0

Installation

Notes from the sysadmin during installation:

$ cd /tmp
$ wget http://genometools.org/pub/genometools-1.5.9.tar.gz
$ tar xf genometools-1.5.9.tar.gz
$ cd genometools-1.5.9
$ sudo mkdir -p /export/apps/aegean/0.16.0
$ sudo chown aorth /export/apps/aegean/0.16.0
$ make prefix=/export/apps/aegean/0.16.0
$ make prefix=/export/apps/aegean/0.16.0 install
$ cd ..
$ wget https://github.com/BrendelGroup/AEGeAn/archive/v0.16.0.tar.gz
$ tar xf v0.16.0.tar.gz
$ cd AEGeAn-0.16.0
$ make prefix=/export/apps/aegean/0.16.0
$ make prefix=/export/apps/aegean/0.16.0 install install-scripts
$ sudo chown -R root:root /export/apps/aegean/0.16.0
aegean-software.txt · Last modified: 2018/02/05 14:29 by aorth