====== Snakemake ======
The Snakemake workflow management system is a tool to create reproducible and scalable data analyses

===== Information =====

  * Version: 5.7.0
  * Added: October, 2019
  * Link: https://snakemake.readthedocs.io/en/stable/

===== Usage =====

See versions of snakemake which are available:
<code>$ module avail snakemake</code>

Load one version into your environment and run it:
<code>$ module load snakemake/5.7.0
$ snakemake</code>

===== Installation ======
Notes from the sysadmin during installation:

<code>$ sudo mkdir -p /export/apps/snakemake/5.7.0
$ sudo chown aorth /export/apps/snakemake/5.7.0
$ python3.6 -m venv /export/apps/snakemake/5.7.0
$ source /export/apps/snakemake/5.7.0/bin/activate
$ pip install --upgrade setuptools pip
$ pip install snakemake
$ sudo chown -R root:root /export/apps/snakemake/5.7.0</code>