====== CD-HIT ======
A program for clustering and comparing protein or nucleotide sequences.

===== Information =====

  * Version: 4.6.8
  * Added: August, 2016
  * Updated: November, 2018
  * Link: http://weizhongli-lab.org/cd-hit/

===== Usage =====

See which versions of cd-hit are available:
<code>$ module avail cd-hit</code>

Load one version into your environment and run it:
<code>$ module load cd-hit/4.6.8</code>

===== Installation ======

Notes from the sysadmin during installation:

<code>$ cd /tmp
$ wget https://github.com/weizhongli/cdhit/archive/V4.6.8.tar.gz
$ cd cdhit-4.6.8
$ make
$ sudo mkdir -p /export/apps/cd-hit/4.6.8
$ sudo chown aorth /export/apps/cd-hit/4.6.8
$ PREFIX=/export/apps/cd-hit/4.6.8 make install
$ sudo chown root /export/apps/cd-hit/4.6.8/*</code>